Capabilities and Facilities
The Joint Genome Institute: A DOE User Facility for Genomics-enabled Discovery (LBNL, LLNL)
Environmental Molecular Sciences Laboratory (PNNL)
EDGE Bioinformatics: Next Generation Sequencing for Exploring Genomes and Metagenomes (LANL)
KBase: The U.S. Department of Energy Systems Biology Knowledgebase (LBNL, ANL, ORNL)
Software and Tools
ART: A Machine Learning Recommendation Tool for Guiding Synthetic Biology (LBNL)
Bacterial Quantitative Trait-Locus Mapping (ORNL
Jungle Express: Efficient Gene Expression at Negligible Cost (LBNL)
TNT Digestion-Ligation Buffer Formulation (ORNL)
Novel Fungal Auto-inducible Expression System (LBNL)
MAGI: Metabolite, Annotation, and Gene Integration System (LBNL)
Arrowland: A Multiscale Interactive Tool for Omics Data Visualization (LBNL, SNL)
Microbial and Plant Engineering
Engineered Microbes for Plastic Degradation and Upcycling (NREL)
Transformable Rhodobacter Strains, Method for Producing Transformable Rhodobacter Strains (ANL)
Engineered Photosynthetic Bacteria, Method of Manufacture of Biofuels (ANL)
Creating Synthetic Microbial Consortia (PNNL)
Method and Strain for Sugar Conversion (ORNL)
Synthetic Promoters Useful for Expression in Plant Cells (LBNL)
Agrobacterium-mediated Transformation of Lipomyces (PNNL)
Novel Genes Controlling Cell Wall Biosynthesis (ORNL)
Nanoengineered Membranes for Controlled Transport (ORNL)
Conserved Function between Human and Plant (ORNL)
Fatty Alcohols from Engineered Yeast (LBNL)
Alkyl Lactones from Hydroxy Fatty Acids (LBNL)
Participating DOE laboratories and contact information
ANL Argonne National Laboratory
Phil Smith, PESmith@anl.gov
BNL Brookhaven National Laboratory
Poornima Upadhya, PUpadhya@bnl.gov
INL Idaho National Laboratory
Ryan Bills, Ryan.Bills@inl.gov
LBNL Lawrence Berkeley National Laboratory
Robin Johnston, RJohnston@lbl.gov
LLNL Lawrence Livermore National Laboratory
Hannah Farquar, farquar3@llnl.gov
LANL Los Alamos National Laboratory
Marc Steven Witkowski, Witk@lanl.gov
NREL National Renewable Energy Laboratory
Eric Payne, Eric.Payne@nrel.gov
ORNL Oak Ridge National Laboratory
Jennifer Caldwell, CaldwellJT@ornl.gov
PNNL Pacific Northwest National Laboratory
Allan Tuan, Allan.Tuan@pnnl.gov
SNL Sandia National Laboratory
Joel Sikora, JSikora@sandia.gov
